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AT1G68585.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.791
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J4TZeggNOG:ENOG4111EDUEMBL:AK229745EMBL:AY084276
EMBL:BT028878EMBL:CP002684EnsemblPlants:AT1G68585EnsemblPlants:AT1G68585.1
entrez:843188GeneID:843188Gramene:AT1G68585.1HOGENOM:HOG000272697
KEGG:ath:AT1G68585PhylomeDB:Q8LGG7Proteomes:UP000006548RefSeq:NP_564933.1
TAIR:AT1G68585UniGene:At.35504UniGene:At.71121UniProt:Q8LGG7
Coordinates (TAIR10) chr1:+:25756911..25757426
Molecular Weight (calculated) 12875.80 Da
IEP (calculated) 8.20
GRAVY (calculated) 0.04
Length 116 amino acids
Sequence (TAIR10)
(BLAST)
001: MATLSQIVEE ELEPSLRSKL SRTSETSLAS VASLSMPLIQ EIVLSADIRC SDCQEKVADI MARMIETYSI LVSVLEKKVT LTCTYSGDRR VSKSYGEALL
101: CKISTIKRLI CPSRKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)