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AT1G68400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G26730.1); Has 160938 Blast hits to 120966 proteins in 4540 species: Archae - 117; Bacteria - 17746; Metazoa - 43976; Fungi - 9280; Plants - 71738; Viruses - 378; Other Eukaryotes - 17703 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G68400-MONOMERBioGrid:28390EC:2.7.11.1eggNOG:ENOG410IKP2eggNOG:ENOG4111APIEMBL:AC015986EMBL:AF378890
EMBL:AY102147EMBL:CP002684EMBL:FJ708673EnsemblPlants:AT1G68400EnsemblPlants:AT1G68400.1entrez:843169Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:843169Genevisible:Q9M9C5GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016021
Gramene:AT1G68400.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF44HOGENOM:HOG000116554InParanoid:Q9M9C5IntAct:Q9M9C5InterPro:IPR000719
InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675
iPTMnet:Q9M9C5KEGG:ath:AT1G68400OMA:FERGKMVPaxDb:Q9M9C5Pfam:PF00069Pfam:PF08263Pfam:Q9M9C5
Pfscan:PS50011Pfscan:PS51257Pfscan:PS51450PhylomeDB:Q9M9C5PIR:H96707PRIDE:Q9M9C5PRO:PR:Q9M9C5
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:Q9M9C5Proteomes:UP000006548RefSeq:NP_177007.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9M9C5STRING:3702.AT1G68400.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT1G68400TMHMM:TMhelixUniGene:At.19099UniProt:Q9M9C5
Coordinates (TAIR10) chr1:-:25646401..25648916
Molecular Weight (calculated) 73524.80 Da
IEP (calculated) 8.40
GRAVY (calculated) -0.23
Length 670 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)