AT1G68040.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.932 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:25502876..25505224 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40487.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.95 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||
| Length | 363 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKVEIVRNS LPMSGGDGPN SYSKNSHLQR KTTSLLKEKI DKLVLEKLNA KTLISSDSNT FRIADLGCAT GPNTFFLVDN IIKSIETSLR KSNSSKPEFL 101: VFFNDLPQND FNTLFTSLPQ DRSYLAVGVP GSFYGRVLPQ SSVHIVVTMG ATHWLSSVPK EVLDKSSKAW NKGKVHYSNA ADEVVKAYRD QFGRDMEKFL 201: EARATEIVSG GLLVVGMCGI PKGMPFSNLA DSIMYTSMAD VLTQMHSEGL ISEEQVDTFN IPIYSATPEE VTVLVVKNGC FTVESMELMD PTAWLKRPTN 301: VEDVRHWMVC IKATMGSLFI NHFGEHLLDD VFDRLTAKLV GLTEKIESSY REKVMLFFAL QRK |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)