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AT1G68010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : hydroxypyruvate reductase
Curator
Summary (TAIR10)
Encodes hydroxypyruvate reductase.
Computational
Description (TAIR10)
hydroxypyruvate reductase (HPR); FUNCTIONS IN: glycerate dehydrogenase activity, poly(U) RNA binding; INVOLVED IN: photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 27648 Blast hits to 27644 proteins in 2724 species: Archae - 466; Bacteria - 17022; Metazoa - 727; Fungi - 1147; Plants - 556; Viruses - 5; Other Eukaryotes - 7725 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G68010-MONOMERBioCyc:ARA:GQT-1153-MONOMERBioCyc:MetaCyc:AT1G68010-MONOMERBioGrid:28350BRENDA:1.1.1.29BRENDA:1.1.1.81EC:1.1.1.29
eggNOG:COG1052eggNOG:KOG0069EMBL:AC012563EMBL:AF370221EMBL:AK226564EMBL:AK317543EMBL:AY099552
EMBL:AY113871EMBL:BT001237EMBL:CP002684EMBL:D85339EnsemblPlants:AT1G68010EnsemblPlants:AT1G68010.1entrez:843129
Gene3D:3.40.50.720GeneID:843129Genevisible:Q9C9W5GO:GO:0005777GO:GO:0008465GO:GO:0009854GO:GO:0042631
GO:GO:0051287GO:GO:0071482gramene_pathway:1.1.1.29gramene_pathway:PWY-181hmmpanther:PTHR10996hmmpanther:PTHR10996:SF169HOGENOM:HOG000136700
InParanoid:Q9C9W5IntAct:Q9C9W5InterPro:IPR006139InterPro:IPR006140InterPro:IPR016040InterPro:IPR029752KEGG:ath:AT1G68010
KO:K15893OMA:DNDCRLEPaxDb:Q9C9W5Pfam:PF00389Pfam:PF02826Pfam:Q9C9W5PhylomeDB:Q9C9W5
PIR:B96703PRIDE:Q9C9W5PRO:PR:Q9C9W5ProMEX:Q9C9W5PROSITE:PS00065ProteinModelPortal:Q9C9W5Proteomes:UP000006548
RefSeq:NP_001185349.1RefSeq:NP_176968.1scanprosite:PS00065SMR:Q9C9W5STRING:3702.AT1G68010.2SUPFAM:SSF51735SUPFAM:SSF52283
TAIR:AT1G68010tair10-symbols:ATHPR1tair10-symbols:HPRUniGene:At.339UniPathway:UPA00951UniProt:Q9C9W5
Coordinates (TAIR10) chr1:+:25493418..25495720
Molecular Weight (calculated) 42250.30 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.04
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)