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AT1G68000.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.574
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatidylinositol synthase 1
Curator
Summary (TAIR10)
phosphatidylinositol synthase 1
Computational
Description (TAIR10)
phosphatidylinositol synthase 1 (PIS1); CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (TAIR:AT4G38570.1); Has 2907 Blast hits to 2907 proteins in 1088 species: Archae - 25; Bacteria - 1785; Metazoa - 167; Fungi - 194; Plants - 81; Viruses - 0; Other Eukaryotes - 655 (source: NCBI BLink).
Protein Annotations
BRENDA:2.7.8.11EC:2.7.8.11eggNOG:COG0558eggNOG:KOG3240EMBL:AC012563EMBL:AJ000539EMBL:AY087327
EMBL:AY140047EMBL:CP002684EnsemblPlants:AT1G68000EnsemblPlants:AT1G68000.1entrez:843128GeneID:843128Genevisible:Q8LBA6
GO:GO:0003881GO:GO:0005783GO:GO:0005794GO:GO:0008654GO:GO:0016020GO:GO:0016021GO:GO:0046872
Gramene:AT1G68000.1hmmpanther:PTHR15362hmmpanther:PTHR15362:SF4HOGENOM:HOG000204051InParanoid:Q8LBA6InterPro:IPR000462InterPro:IPR014387
KEGG:00562+2.7.8.11KEGG:00564+2.7.8.11KEGG:04070+2.7.8.11KEGG:ath:AT1G68000KO:K00999OMA:YIRVLMNPaxDb:Q8LBA6
Pfam:PF01066Pfam:Q8LBA6PhylomeDB:Q8LBA6PIR:T52643PIRSF:PIRSF000848PRO:PR:Q8LBA6PROSITE:PS00379
ProteinModelPortal:Q8LBA6Proteomes:UP000006548Reactome:R-ATH-1483226RefSeq:NP_176967.1scanprosite:PS00379SMR:Q8LBA6STRING:3702.AT1G68000.1
TAIR:AT1G68000tair10-symbols:ATPIStair10-symbols:ATPIS1tair10-symbols:PIS1TMHMM:TMhelixUniGene:At.24677UniProt:Q8LBA6
Coordinates (TAIR10) chr1:+:25491346..25492930
Molecular Weight (calculated) 25862.10 Da
IEP (calculated) 8.67
GRAVY (calculated) 0.53
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKKERPRPE KLSVYLYIPN IVGYMRVLLN CVAFAVCFSN KPLFSVLYFF SFCCDAVDGW VARRFNQVST FGAVLDMVTD RVSTACLLVI LSQIYRPSLV
101: FLSLLALDIA SHWLQMYSTF LAGKSSHKDV KDSTSWLFRL YYGNRIFMCY CCVSCEVLYI ILLLIAKNQS ENLLNVVVAT LTQISPLSFL LALTLFGWSM
201: KQTINVIQMK TAADVCVLYD IEKQQKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)