AT1G67890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.580 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PAS domain-containing protein tyrosine kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 128751 Blast hits to 126912 proteins in 4876 species: Archae - 309; Bacteria - 16105; Metazoa - 47584; Fungi - 11405; Plants - 33369; Viruses - 523; Other Eukaryotes - 19456 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25457345..25462436 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85222.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.77 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.62 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 765 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD 101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG 201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG 301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER 401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT 501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH 601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN 701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)