AT1G67880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.745 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta-1,4-N-acetylglucosaminyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25454081..25455453 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45881.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.91 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 390 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC 101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL 201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI 301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)