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AT1G67870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.830
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; Has 8710 Blast hits to 3981 proteins in 499 species: Archae - 16; Bacteria - 1349; Metazoa - 4702; Fungi - 419; Plants - 500; Viruses - 11; Other Eukaryotes - 1713 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTSEeggNOG:ENOG41107JXEMBL:AF386981EMBL:AY052272EMBL:AY081463EMBL:AY085001EMBL:AY098964
EMBL:CP002684EnsemblPlants:AT1G67870EnsemblPlants:AT1G67870.1entrez:843115GeneID:843115Gramene:AT1G67870.1HOGENOM:HOG000151145
KEGG:ath:AT1G67870OMA:HGMQHQGProteomes:UP000006548RefSeq:NP_564912.1STRING:3702.AT1G67870.1TAIR:AT1G67870UniGene:At.21184
UniProt:Q93VS6
Coordinates (TAIR10) chr1:-:25449593..25450943
Molecular Weight (calculated) 30942.40 Da
IEP (calculated) 8.46
GRAVY (calculated) -1.21
Length 279 amino acids
Sequence (TAIR10)
(BLAST)
001: MLDKLTRGIG GLRRGHGHFQ ASAGFGFEEH KEFSSRVESS GGFVDRQARY NHRTGNHGRP PMHVWDEEDS DSDVEEFFES SRTQHTTALP QPLHMNFRPP
101: PPVTQPHHNG KMGKIGNGLQ QGHEIHGMKH QGGHGIQHHD IHGMQHQGGH GMQHQGMHGM QHQGGHGMQH QGGHGMQHQG MHGMQHQGGH GMEHQGGHGM
201: QHQDMHGMQH QGRHGMQHQG GHEMQHQGMH GMQHQGGHRI QHQGMHGMQH PGGVVVNATE NWRVSKITGQ KLGWGGKGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)