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AT1G67710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 11
Curator
Summary (TAIR10)
Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.
Computational
Description (TAIR10)
response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0745eggNOG:ENOG410IMXQEMBL:AK228216EnsemblPlants:AT1G67710EnsemblPlants:AT1G67710.1entrez:843096ExpressionAtlas:Q0WRT0
Gene3D:1.10.10.60GeneID:843096GO:GO:0000160GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
Gramene:AT1G67710.1hmmpanther:PTHR26402hmmpanther:PTHR26402:SF610InterPro:IPR001005InterPro:IPR001789InterPro:IPR006447InterPro:IPR009057
InterPro:IPR011006InterPro:IPR017053KEGG:ath:AT1G67710KO:K14491OMA:LPWNDVPPaxDb:Q0WRT0Pfam:PF00072
Pfam:PF00249Pfam:Q9FXD6Pfscan:PS50110PhylomeDB:Q0WRT0PIRSF:PIRSF036392PRIDE:Q0WRT0PROSITE:PS50110
ProteinModelPortal:Q0WRT0RefSeq:NP_176938.1SMART:SM00448SMR:Q0WRT0SMR:Q9FXD6STRING:3702.AT1G67710.1SUPFAM:SSF46689
SUPFAM:SSF52172TAIR:AT1G67710tair10-symbols:ARR11TIGRfam:TIGR01557TIGRFAMs:TIGR01557UniGene:At.121UniProt:Q0WRT0
UniProt:Q9FXD6
Coordinates (TAIR10) chr1:-:25376994..25378905
Molecular Weight (calculated) 58581.70 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.45
Length 521 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)