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AT1G67700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23851315 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IPQIeggNOG:ENOG4111RV1EMBL:AC008113EMBL:AK316962EMBL:AY050331EMBL:AY085943EMBL:AY116936
EMBL:CP002684EnsemblPlants:AT1G67700EnsemblPlants:AT1G67700.1EnsemblPlants:AT1G67700.2EnsemblPlants:AT1G67700.3entrez:843095ExpressionAtlas:Q8LDL0
GeneID:843095Genevisible:Q8LDL0GO:GO:0004222GO:GO:0006508GO:GO:0006518GO:GO:0009507GO:GO:0009534
GO:GO:0009535GO:GO:0009941GO:GO:0016021hmmpanther:PTHR11804hmmpanther:PTHR11804:SF42HOGENOM:HOG000029183KEGG:ath:AT1G67700
OMA:MEAGMSLPaxDb:Q8LDL0PhylomeDB:Q8LDL0PRIDE:Q8LDL0PRO:PR:Q8LDL0ProteinModelPortal:Q8LDL0Proteomes:UP000006548
RefSeq:NP_001185346.1RefSeq:NP_564903.3RefSeq:NP_850972.1STRING:3702.AT1G67700.2TAIR:AT1G67700UniGene:At.23345UniProt:Q94A67
Coordinates (TAIR10) chr1:+:25374295..25375716
Molecular Weight (calculated) 26011.40 Da
IEP (calculated) 10.10
GRAVY (calculated) -0.48
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVSMSLNAL TRLPLKNTGR FEEVGLARHS LFSSRTACRE TAVQQRRMVF VVEAKGKKGM AARQYQRTPP PMPKIEDDGN PRFVIFIRMA NVYLWYPLSI
101: IAGGTTAKIM VAAKDNLLGK YIYKDTIARN IAAVIYRDEK EIQKTAIKQH RVLRTATEFR YGYKLVENGN MRAALSTSDV IELPTQDQLK TVFDKVKDYF
201: GDAKESFGKL SSLNPGSDEK TEETSDEKAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)