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AT1G67600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.713
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1); Has 1114 Blast hits to 1114 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1963eggNOG:ENOG410IWSJEMBL:AC008113EMBL:AY086822
EMBL:BT024865EMBL:CP002684EnsemblPlants:AT1G67600EnsemblPlants:AT1G67600.1
entrez:843081GeneID:843081GO:GO:0004601GO:GO:0016021
Gramene:AT1G67600.1hmmpanther:PTHR31446hmmpanther:PTHR31446:SF5HOGENOM:HOG000067103
InterPro:IPR003832KEGG:ath:AT1G67600KO:K09775OMA:HTPPQVF
Pfam:PF02681PhylomeDB:Q9FXC5PIR:E96699Proteomes:UP000006548
RefSeq:NP_176927.1STRING:3702.AT1G67600.1TAIR:AT1G67600TMHMM:TMhelix
UniGene:At.35629UniProt:Q9FXC5
Coordinates (TAIR10) chr1:-:25336701..25337455
Molecular Weight (calculated) 17600.50 Da
IEP (calculated) 7.92
GRAVY (calculated) 0.43
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MEESVASSSS HYISIFTNYP LISAVLAFTI AQFIKFFTSW YKERRWDLKR LVGSGGMPSS HSATVTALAL AVGLQEGFGG SHFAIALVLT TIVMYDATGV
101: RLHAGRQAEV LNQIVYELPA EHPLAETRPL RELLGHTPPQ VIAGGMLGIS TAVVGYLVIL LAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)