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AT1G67300.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.941
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G79820.2); Has 41411 Blast hits to 40853 proteins in 2427 species: Archae - 690; Bacteria - 24236; Metazoa - 4821; Fungi - 7159; Plants - 2674; Viruses - 2; Other Eukaryotes - 1829 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AC002130EMBL:AK226899
EMBL:CP002684EnsemblPlants:AT1G67300EnsemblPlants:AT1G67300.1entrez:843050
ExpressionAtlas:Q9FYG3GeneID:843050Genevisible:Q9FYG3GO:GO:0008643
GO:GO:0016021GO:GO:0022891GO:GO:0031969hmmpanther:PTHR23503
hmmpanther:PTHR23503:SF37HOGENOM:HOG000202868InParanoid:Q9FYG3InterPro:IPR003663
InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846KEGG:ath:AT1G67300
PaxDb:Q9FYG3Pfam:PF00083Pfam:Q9FYG3Pfscan:PS50850
PhylomeDB:Q9FYG3PIR:F96696PRIDE:Q9FYG3PRINTS:PR00171
PRO:PR:Q9FYG3PROSITE:PS00216PROSITE:PS50850ProteinModelPortal:Q9FYG3
Proteomes:UP000006548Reactome:R-ATH-428790RefSeq:NP_176898.1scanprosite:PS00216
SMR:Q9FYG3STRING:3702.AT1G67300.2SUPFAM:SSF103473TAIR:AT1G67300
TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelixUniGene:At.21607
UniGene:At.67017UniProt:Q9FYG3
Coordinates (TAIR10) chr1:-:25193832..25196751
Molecular Weight (calculated) 53129.70 Da
IEP (calculated) 6.85
GRAVY (calculated) 0.62
Length 493 amino acids
Sequence (TAIR10)
(BLAST)
001: MLGLQRETSS MYKRTSSRDY SPMIDVEDSS GLLENDVDNE METTNPSWKC SLPHVLVATI SSFLFGYHLG VVNEPLESIS SDLGFSGDTL AEGLVVSVCL
101: GGAFLGSLFS GGVADGFGRR RAFQICALPM ILGAFVSGVS NSLAVMLLGR FLVGTGMGLG PPVAALYVTE VSPAFVRGTY GSFIQIATCL GLMAALFIGI
201: PVHNITGWWR VCFWLSTIPA ALLALGMFLC AESPQWLFKQ GKIAEAEAEF ERLLGGSHVK TAMAELYKLD LDKTDEPDVV SLSELLYGRH SRVVFIGSTL
301: FALQQLSGIN AVFYFSSTVF KSAGVPSDLG NIFVGVSNLL GSVIAMVLMD KVGRKLLLLW SFIGMAAAMA LQVGATSSYL PHFSALCLSV GGTLVFVLTF
401: ALGAGPVPGL LLPEIFPSRI RAKAMAFCMS VHWVINFFVG LLFLRLLEKL GPRLLYSMFS TFCLMAVMFV KRNVIETKGK TLQEIEISLL AKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)