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AT1G67250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Proteasome maturation factor UMP1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Proteasome maturation factor UMP1; CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: acclimation of photosynthesis to environment (TAIR:AT5G38660.2); Has 220 Blast hits to 220 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 2; Plants - 90; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
DNASU:843045eggNOG:ENOG410XUI5eggNOG:KOG3061EMBL:AK117205EMBL:AY044313EMBL:AY086781EMBL:BT003679
EMBL:CP002684EnsemblPlants:AT1G67250EnsemblPlants:AT1G67250.1entrez:843045GeneID:843045GO:GO:0000502Gramene:AT1G67250.1
hmmpanther:PTHR12828hmmpanther:PTHR12828:SF3InterPro:IPR008012KEGG:ath:AT1G67250KO:K11599OMA:QATIQSEPANTHER:PTHR12828
Pfam:PF05348PhylomeDB:Q94B05Proteomes:UP000006548RefSeq:NP_564892.1STRING:3702.AT1G67250.1TAIR:AT1G67250UniGene:At.24562
UniProt:Q94B05
Coordinates (TAIR10) chr1:-:25163808..25164967
Molecular Weight (calculated) 15736.90 Da
IEP (calculated) 6.81
GRAVY (calculated) -0.47
Length 141 amino acids
Sequence (TAIR10)
(BLAST)
001: MESEKKIAHE IGGVKNDALR FGLHGVKSNI IGSHPLESSY ESEKKSKEAL KRTVIAHAYG TALPLKMDMD RQILSRFQRP PGPIPSSMLG LEVYTGAVDD
101: FGFEDYLNDP RDSETFKPVD FHHGMEVRLG ISKGPIYPSF M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)