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AT1G67070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mannose-6-phosphate isomerase, type I
Curator
Summary (TAIR10)
Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
Computational
Description (TAIR10)
DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G67070-MONOMERBioCyc:MetaCyc:AT1G67070-MONOMEREC:5.3.1.8eggNOG:COG1482
eggNOG:KOG2757EMBL:AC007152EMBL:AF159377EMBL:AK176384
EMBL:AK176481EMBL:BT025995EMBL:CP002684EnsemblPlants:AT1G67070
EnsemblPlants:AT1G67070.1entrez:843027Gene3D:2.60.120.10GeneID:843027
Genevisible:Q9FZH5GO:GO:0004476GO:GO:0008270GO:GO:0009298
GO:GO:0009646GO:GO:0009744GO:GO:0010043GO:GO:0019853
GO:GO:0033591GO:GO:0046680GO:GO:0046686Gramene:AT1G67070.1
gramene_pathway:5.3.1.8gramene_pathway:MANNCAT-PWY-ARAgramene_pathway:PWY-3861gramene_pathway:PWY-5659
gramene_pathway:PWY-882gramene_plant_reactome:1119410gramene_plant_reactome:6876589hmmpanther:PTHR10309
hmmpanther:PTHR10309:SF0HOGENOM:HOG000241277InterPro:IPR001250InterPro:IPR011051
InterPro:IPR014710InterPro:IPR016305InterPro:IPR018050KEGG:00051+5.3.1.8
KEGG:00520+5.3.1.8KEGG:ath:AT1G67070KO:K01809ncoils:Coil
OMA:NYVKLEVPANTHER:PTHR10309PaxDb:Q9FZH5Pfam:PF01238
Pfam:Q9FZH5PhylomeDB:Q9FZH5PIR:E96694PIRSF:PIRSF001480
PRIDE:Q9FZH5PRINTS:PR00714PRO:PR:Q9FZH5PROSITE:PS00965
PROSITE:PS00966ProteinModelPortal:Q9FZH5Proteomes:UP000006548Reactome:R-ATH-446205
RefSeq:NP_176878.1SABIO-RK:Q9FZH5scanprosite:PS00965scanprosite:PS00966
SMR:Q9FZH5STRING:3702.AT1G67070.1SUPFAM:SSF51182TAIR:AT1G67070
tair10-symbols:DIN9tair10-symbols:PMI2TIGRfam:TIGR00218TIGRFAMs:TIGR00218
UniGene:At.35695UniPathway:UPA00126UniProt:Q9FZH5
Coordinates (TAIR10) chr1:+:25042324..25044412
Molecular Weight (calculated) 49251.10 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.23
Length 441 amino acids
Sequence (TAIR10)
(BLAST)
001: MGADAIQTNG HDQAKLTGGE EIQRLRCFVK NYEWGKLGPE SLVARLQEAN TGQRVDSEIP YAEFWMGTHE SGPSHVEFGS GHGVSDKCMV TLKSWVLDNP
101: NLLGSKVVDK WGCDLPFLFK VLSVTKALSI QAHPNKALAE KLHREDPLLY RDNNHKPEIA LAVTPFQALC GFVTLKELKE VITNVPEITE LVGSKAADQI
201: FNVHEHDEDE RIKSVVRLIF TQLMSASNNE TKQVVSRMKN RLLLETKHRE LSEKEKLVLE LEKQYTGDIG VISAFFFNYV KLNPGEALYL DANEPHAYIS
301: GDCVECMAAS DNVVRAGLTP KHRDVQTLCS MLTYKLGYPE ILKGFPLTPY VTRYLPPFDE FEVDHCDLPR GKSTVFPAVP GPSVYLVIEG KGQLRTGSSK
401: VLVNRGDVLF VPADIEIHVT GESDVMKLYR AGVSSRFFQT L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)