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AT1G66940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.978
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67000.1); Has 305 Blast hits to 263 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:AC007152EMBL:AC083891EMBL:AK119058EMBL:BT008352EMBL:CP002684
EnsemblPlants:AT1G66940EnsemblPlants:AT1G66940.1entrez:843012ExpressionAtlas:Q9FZI4GeneID:843012GO:GO:0016021GO:GO:0016301
Gramene:AT1G66940.1hmmpanther:PTHR33138hmmpanther:PTHR33138:SF3HOGENOM:HOG000152599InterPro:IPR032872OMA:TSSTFICPfam:PF14380
PhylomeDB:Q9FZI4PIR:C96693Proteomes:UP000006548RefSeq:NP_564887.1STRING:3702.AT1G66940.1TAIR:AT1G66940TMHMM:TMhelix
UniGene:At.35714UniProt:Q9FZI4
Coordinates (TAIR10) chr1:-:24973201..24974684
Molecular Weight (calculated) 36660.00 Da
IEP (calculated) 7.87
GRAVY (calculated) -0.05
Length 332 amino acids
Sequence (TAIR10)
(BLAST)
001: MYHLPTSCLV IFFLLSLFHP LPCDSSNQGL GWCETLFQCG NITAGFPFSG GNRHKECGHP SLELHCNKNN ITSLFISNQK YSVLRIDQTS NTLTLAKQNL
101: LGSFCSSVFT NTTLPPETFE LSRTYKSVTI FYQCSSVLPN LSSYTCPEIG PISVSESPEK YPESCRSSFT VKVPTSFDTK EKELNVTNLE SVLRKGFEVT
201: VVINENTCQE CLSSLGRCHV FNENLTPGVK CRPPSDSEGS CGYNQTSSTF LCYCKDPYSL SCSSGKSNIR WIIGGVLILI LIVSGIIVSL VFLCLCCRAK
301: IVRKKKSSDA LEVPPRPIKE SPTLSEDIKA RT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)