AT1G66880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38210.1); Has 129213 Blast hits to 127053 proteins in 4833 species: Archae - 128; Bacteria - 14675; Metazoa - 47420; Fungi - 11551; Plants - 35229; Viruses - 624; Other Eukaryotes - 19586 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24946928..24955438 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 144441.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1296 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MKNMNFERLS ELMAFYHLMG KISSECGNIT AGFPFWGGNR LKHCGLPSLE LHCSKNITSL FISSQEFYVL HLNQTSKTLK LARTDLLGSI CNSTFTTITL 0101: PPNIFELSPT YKRLTVFYYC FLLTHYVSSY KCPMRGFIFV SENHEYHKIC GDTFTVIVPT RFGAGEKELN MTNLESVLSK GFEVKVKIDD TSCQECLSSH 0201: GSCGFNETLP VGGKCSPLNP TTQPPPQPGD RHKHCGHPLL ELRCDQNKST SLFISDQEFF VLHVDQTSYS LTLARPDLLH SFCSLTFTNT TLPPEIFELS 0301: PAYKSVTFYH CYPVLPDLSN YTCPVIGPIS VSGNPEDHET CFPNFAANVP TSFVTKEKKL NIANLESVLE KGFEVNMNVI MKACQACSYS NESCGFDENF 0401: PFEVKCKPHH SPTAKFQCGN ITAGFPFSGG NRPQICGHPS LELHCYNNMA SIIISDHFYN VLHIDQTSNT LRLARAELEG SFCNATYTAT TLPSKIFEIS 0501: STYKSLTVFY LCDPKVSYRS SYTCPGRGLV SVSQNSDYHN SCQDSFTINV PKSFVPEEKE LDVTNLESAL REGFEVKVKV DEKTCQKCTS SGGTCGFQNS 0601: TQICCKEASS LGCNKVHPLP DATELELHRR CNGTFSCGDQ RELFYPFWTS GREDCGHPDF KLDDCSGRFA ELSISSVKFR ILASVYGSNI IRLGRSEYIG 0701: DLCPQDPINA PFSESVLPFA PNTELLTIFY NCSRDFPQQV TNFGDFACGD DSDDDRSYYV TRNLSFPPLS EINDLLYDFS QSCDRNVSIP ASGSTLNILQ 0801: STPSNDNLKK ALEYGFELEL NQDCRTCIDS KGACGYSQTS SRFVCYSIEE PQTPTPPNPT RNKDTSLSIG AKAGIAVASV SGLAILLLAG LFLCIRRRRK 0901: TQDAQYTSKS LPITSYSSRD TSRNPTSTTI SSSSNHSLLP SISNLANRSD YCGVQVFSYE ELEEATENFS RELGDGGFGT VYYGVLKDGR AVAVKRLYER 1001: SLKRVEQFKN EIEILKSLKH PNLVILYGCT SRHSRELLLV YEYISNGTLA EHLHGNRAEA RPLCWSTRLN IAIETASALS FLHIKGIIHR DIKTTNILLD 1101: DNYQVKVADF GLSRLFPMDQ THISTAPQGT PGYVDPEYYQ CYQLNEKSDV YSFGVVLTEL ISSKEAVDIT RHRHDINLAN MAVSKIQNNA LHELVDSSLG 1201: YDNDPEVRRK MMAVAELAFR CLQQERDVRP AMDEIVEILR GIKDDEKKRV LVKSPDVVDI ECGGGDDVGL LRNSVPPPIS PETDKWTSSS DTAASL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)