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AT1G66880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:22318864 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38210.1); Has 129213 Blast hits to 127053 proteins in 4833 species: Archae - 128; Bacteria - 14675; Metazoa - 47420; Fungi - 11551; Plants - 35229; Viruses - 624; Other Eukaryotes - 19586 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66880-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC013288EMBL:AC083891EMBL:BX814972
EMBL:CP002684EnsemblPlants:AT1G66880EnsemblPlants:AT1G66880.1entrez:843006Gene3D:2.60.120.200GeneID:843006GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT1G66880.1hmmpanther:PTHR27005hmmpanther:PTHR27005:SF13InParanoid:F4HQ17
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441InterPro:IPR032872
iPTMnet:F4HQ17KEGG:ath:AT1G66880ncoils:CoilPaxDb:F4HQ17Pfam:PF07714Pfam:PF14380Pfscan:PS50011
PIR:E96692PRIDE:F4HQ17PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4HQ17Proteomes:UP000006548
RefSeq:NP_176860.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220STRING:3702.AT1G66880.1SUPFAM:SSF56112TAIR:AT1G66880
TMHMM:TMhelixUniGene:At.22212UniProt:F4HQ17
Coordinates (TAIR10) chr1:+:24946928..24955438
Molecular Weight (calculated) 144441.00 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.30
Length 1296 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKNMNFERLS ELMAFYHLMG KISSECGNIT AGFPFWGGNR LKHCGLPSLE LHCSKNITSL FISSQEFYVL HLNQTSKTLK LARTDLLGSI CNSTFTTITL
0101: PPNIFELSPT YKRLTVFYYC FLLTHYVSSY KCPMRGFIFV SENHEYHKIC GDTFTVIVPT RFGAGEKELN MTNLESVLSK GFEVKVKIDD TSCQECLSSH
0201: GSCGFNETLP VGGKCSPLNP TTQPPPQPGD RHKHCGHPLL ELRCDQNKST SLFISDQEFF VLHVDQTSYS LTLARPDLLH SFCSLTFTNT TLPPEIFELS
0301: PAYKSVTFYH CYPVLPDLSN YTCPVIGPIS VSGNPEDHET CFPNFAANVP TSFVTKEKKL NIANLESVLE KGFEVNMNVI MKACQACSYS NESCGFDENF
0401: PFEVKCKPHH SPTAKFQCGN ITAGFPFSGG NRPQICGHPS LELHCYNNMA SIIISDHFYN VLHIDQTSNT LRLARAELEG SFCNATYTAT TLPSKIFEIS
0501: STYKSLTVFY LCDPKVSYRS SYTCPGRGLV SVSQNSDYHN SCQDSFTINV PKSFVPEEKE LDVTNLESAL REGFEVKVKV DEKTCQKCTS SGGTCGFQNS
0601: TQICCKEASS LGCNKVHPLP DATELELHRR CNGTFSCGDQ RELFYPFWTS GREDCGHPDF KLDDCSGRFA ELSISSVKFR ILASVYGSNI IRLGRSEYIG
0701: DLCPQDPINA PFSESVLPFA PNTELLTIFY NCSRDFPQQV TNFGDFACGD DSDDDRSYYV TRNLSFPPLS EINDLLYDFS QSCDRNVSIP ASGSTLNILQ
0801: STPSNDNLKK ALEYGFELEL NQDCRTCIDS KGACGYSQTS SRFVCYSIEE PQTPTPPNPT RNKDTSLSIG AKAGIAVASV SGLAILLLAG LFLCIRRRRK
0901: TQDAQYTSKS LPITSYSSRD TSRNPTSTTI SSSSNHSLLP SISNLANRSD YCGVQVFSYE ELEEATENFS RELGDGGFGT VYYGVLKDGR AVAVKRLYER
1001: SLKRVEQFKN EIEILKSLKH PNLVILYGCT SRHSRELLLV YEYISNGTLA EHLHGNRAEA RPLCWSTRLN IAIETASALS FLHIKGIIHR DIKTTNILLD
1101: DNYQVKVADF GLSRLFPMDQ THISTAPQGT PGYVDPEYYQ CYQLNEKSDV YSFGVVLTEL ISSKEAVDIT RHRHDINLAN MAVSKIQNNA LHELVDSSLG
1201: YDNDPEVRRK MMAVAELAFR CLQQERDVRP AMDEIVEILR GIKDDEKKRV LVKSPDVVDI ECGGGDDVGL LRNSVPPPIS PETDKWTSSS DTAASL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)