AT1G66540.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.857 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Cytochrome P450 superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 36477 Blast hits to 36375 proteins in 1869 species: Archae - 65; Bacteria - 6588; Metazoa - 11586; Fungi - 7386; Plants - 9188; Viruses - 3; Other Eukaryotes - 1661 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:24824837..24826502 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43728.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.85 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||
| Length | 386 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSAPYSEHW RNLRRIGAVE IFSNHRLNSF YTIRRDEIRR LIARLSRSPN ASLEFAKVEM NSMLSNLAFN NIIRMVTGKC YYGDGAEDDP EAKRVRQLIA 101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL 201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE 301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)