AT1G66520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : formyltransferase, putative | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24816330..24818693 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38504.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.80 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 355 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MILRRFICYN ASSTVSSIAP SPKKKPLIFL GSPQVSVSVL EALFNASNAP NSSFEVAGIV TQPPSRRDRG KKVLPSPVAQ YALDKGLPSD LIFSPEKAGD 101: EAFLSALREL QPELCITAAY GNILPTKFLK IPVHGTVNIH PSLLPLYRGA APVQRALQDG VPETGVSLAF TVRKLDAGPV IASKRFQVDD LIKAPELLSF 201: LFSEGSNLLI RELPSIFDGS AKSKAAPQDD SKATLAPKIA PDEAWLSFDQ EAFVLHNKVR AFAGWPGTRA KVVVLDEKSG QQNVLELKIM STRVCKDLEI 301: QDSEQDYVTF KKGSLIFPCR GGTALEVLEV QLPGKKAINA AAFWNGLRGQ KLKKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)