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AT1G66510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.449
nucleus 0.296
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AAR2 protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AAR2 protein family; CONTAINS InterPro DOMAIN/s: AAR2 (InterPro:IPR007946); Has 319 Blast hits to 307 proteins in 161 species: Archae - 0; Bacteria - 3; Metazoa - 130; Fungi - 91; Plants - 45; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Protein Annotations
DNASU:842969eggNOG:ENOG410XSI4eggNOG:KOG3937EMBL:AC074025
EMBL:AY052224EMBL:AY060499EMBL:CP002684EnsemblPlants:AT1G66510
EnsemblPlants:AT1G66510.1EnsemblPlants:AT1G66510.2entrez:842969ExpressionAtlas:Q9C711
GeneID:842969Gramene:AT1G66510.1Gramene:AT1G66510.2hmmpanther:PTHR12689
HOGENOM:HOG000230890InterPro:IPR007946KEGG:ath:AT1G66510KO:K13205
OMA:PYDYRYVPANTHER:PTHR12689Pfam:PF05282PhylomeDB:Q9C711
PIR:G96690Proteomes:UP000006548RefSeq:NP_564876.1RefSeq:NP_849850.1
SMR:Q9C711STRING:3702.AT1G66510.1TAIR:AT1G66510UniGene:At.26432
UniGene:At.35761UniProt:Q9C711
Coordinates (TAIR10) chr1:+:24812881..24815804
Molecular Weight (calculated) 45612.30 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.32
Length 399 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSEKALELV KHGATLLFLD VPQYTLVGID TQIFAVGPAF KGIKMIPPGI HFVFYSSSTR DGREFSPTIG FFVDVAPSQV IVRKWNQQDE WLTKVSEEEE
101: ERYSQAVRSL EFDKNLGPYN LKQYGEWRHL SNYITKDVVE KFEPVGGEIT VTYESAILKG GPKTAMEIAL DTQMKKSKFT TSSTEQPKGN RFYYTSIPRI
201: IKHKGMSGQE LTSMNLDKTQ LLESVLSKEY KDSEDLLLGE LQFSFVAFLM GQSLESFMQW KSIVSLLLGC TSAPFQTRSQ LFTKFIKVIY HQLKYGLQKE
301: NSGPETGIHA LLDDSWLASD SFLHFLCKDF FALVEETSVV DGDLLSWTRK FKELLENRLG WEFQKKSAVD GIYFEEDDEY APVVEMLDES HGEYMDKTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)