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AT1G66480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.547
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : plastid movement impaired 2
Curator
Summary (TAIR10)
Involved in chloroplast avoidance movement under intermediate and high light intensities
Computational
Description (TAIR10)
plastid movement impaired 2 (PMI2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to blue light, N-terminal protein myristoylation, chloroplast avoidance movement; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G37840.1); Has 100 Blast hits to 100 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:28187eggNOG:ENOG410JCHKeggNOG:ENOG41117UAEMBL:AC074025
EMBL:AK227786EMBL:BT011775EMBL:BT012406EMBL:CP002684
EnsemblPlants:AT1G66480EnsemblPlants:AT1G66480.1entrez:842966GeneID:842966
Genevisible:Q6NLC8GO:GO:0005886hmmpanther:PTHR33148hmmpanther:PTHR33148:SF6
HOGENOM:HOG000242814InParanoid:Q6NLC8IntAct:Q6NLC8InterPro:IPR025322
iPTMnet:Q6NLC8KEGG:ath:AT1G66480OMA:IYMERSGPaxDb:Q6NLC8
Pfam:PF14009Pfam:Q6NLC8PhylomeDB:Q6NLC8PRIDE:Q6NLC8
PRO:PR:Q6NLC8Proteomes:UP000006548RefSeq:NP_176821.2STRING:3702.AT1G66480.1
TAIR:AT1G66480UniGene:At.17486UniProt:Q6NLC8
Coordinates (TAIR10) chr1:-:24805770..24807405
Molecular Weight (calculated) 24732.90 Da
IEP (calculated) 10.52
GRAVY (calculated) -0.57
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNSITVKRK RAKVMKIDGE TFRIKTPVTA REVTADYPGY VLLDSQAVKH FGVRSKPLEP NQTLKPKKTY FLVELPKLPP ETTAVDTENK LPYRRVMSGI
101: HVGAKERLDM LMLSRRTVSD VTIGRSDGGD GFGPELGPGH TSVRLRLPRS QITKLMEENN NDASAIAEKI LGIYMERSGE LGGGRGGVDG RRELGSGEIK
201: AREKQVSFAG EGGRELPVLW SRSGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)