AT1G66130.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.799 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Oxidoreductase family protein (TAIR:AT4G09670.1); Has 9966 Blast hits to 9965 proteins in 1788 species: Archae - 209; Bacteria - 7166; Metazoa - 212; Fungi - 379; Plants - 93; Viruses - 0; Other Eukaryotes - 1907 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:24615040..24616742 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40100.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.45 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||
| Length | 364 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDTKTVRFG LLGCIRFASK FVRTVTESSN AVIIAISDPS LETAKTFATG NNLSPETVTI YGSYEELLND ANVDAVYLTM PVTQRARWAV TAAEKKKHVL 101: VEKPPAQDAT ELEKIVEACE YNGVQFMDGT IWLHHQRTVK IRDTMFDSGL LGDVRHMYST MTTPVPEQVL ERLTKEAMGL AGAIGELGWY PIGAALWAMS 201: YQMPISVRAL PSSVSTNSVG TILSCTASLQ FGSTATTTAI VHCSFLSQLS TDLAISGSKG SIQMNDYVIP YKEDKAWFEY TSGAKFVDMH IGWNVTPERV 301: TVDCSGTPET QEAMMLREFT RLVEGIKRGD LEADRRWPDI SKKTQLIVDA VKKSVDIGCE VVHL |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)