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AT1G66020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Terpenoid cyclases/Protein prenyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1629 Blast hits to 1603 proteins in 178 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 1621; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66020-MONOMEREC:4.2.3.-EMBL:AC026480EMBL:AK117510EMBL:BT005423EMBL:CP002684EnsemblPlants:AT1G66020
EnsemblPlants:AT1G66020.1entrez:842915Gene3D:1.10.600.10Gene3D:1.50.30.10GeneID:842915Genevisible:Q9C8E3GO:GO:0000287
GO:GO:0005737GO:GO:0010333GO:GO:0016114Gramene:AT1G66020.1hmmpanther:PTHR31045hmmpanther:PTHR31045:SF4HOGENOM:HOG000232971
InParanoid:Q9C8E3InterPro:IPR001906InterPro:IPR005630InterPro:IPR008930InterPro:IPR008949iPTMnet:Q9C8E3KEGG:ath:AT1G66020
OMA:GMGHEATPaxDb:Q9C8E3Pfam:PF01397Pfam:PF03936Pfam:Q9C8E3PhylomeDB:Q9C8E3PIR:F96684
PRIDE:Q9C8E3PRO:PR:Q9C8E3ProteinModelPortal:Q9C8E3Proteomes:UP000006548RefSeq:NP_176776.1SMR:Q9C8E3SUPFAM:SSF48239
SUPFAM:SSF48576TAIR:AT1G66020UniGene:At.35813UniPathway:UPA00213UniProt:Q9C8E3
Coordinates (TAIR10) chr1:+:24577576..24579997
Molecular Weight (calculated) 69348.40 Da
IEP (calculated) 6.18
GRAVY (calculated) -0.22
Length 598 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEFK TVTKGNFDLA KWAHAVHVPS FEEYMEVGEE EISVCSTLAG IFMCMEQKAT KEDYEWLKSR PKFIQTLCAR CRLKNDITGF
501: EDDMSRGYVT NAVNCYMKQY GVTKQEAFGE LNKIIVEADK ILNEEFLTTV GVRHCVLKAT FDLARMIFIT YNGYEGFTYP QGKIKEYMTS LFVDRIGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)