AT1G65950.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 9 (TAIR:AT2G40090.1); Has 9535 Blast hits to 9504 proteins in 1790 species: Archae - 124; Bacteria - 4369; Metazoa - 419; Fungi - 493; Plants - 742; Viruses - 14; Other Eukaryotes - 3374 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24546860..24551119 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62043.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.95 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||
| Length | 551 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEILRKFKIL GRSKSPIFAF TVTAGLALTA VTGSATAVSI FRDSPSNKIA TAVEGVVRSS RAIYSITLTV ADYKYTLRRL PADSDEYLQR LTEVHSRSAK 101: RILKLCESNK GFYVKAGQFV ATLKLVPKEY SLALSSLQDK AVPCNFQEIK QVLTSNLGQN LTEIYLSFDE EPIAAASIAQ VHHAVLKNHQ EVAVKVQYPG 201: LKQNMMLDTM IMSFLSKSVA KIFPEYRFDW LVYEFVKSIS QELDFLQEAK NSERIAKNFK HNKMITIPTV FSEFTTTQVL TMQFCKGFKV DDVESLKRTN 301: VSPEKVAKVL VEVFAEMIFV HGFIHGDPHP GNILVSPEGQ NGFSLVLLDH GNCKTLDEAF RRDFCRLWEA LILLDSNKIQ ELGKQFGVGK YAKFFPVIFT 401: GRTSESKSGL GKGMSIQERQ KLKQELKLLR LEDVTTFMGS LPPDFLTVLR TDGLIRSITL KLGAPQRVRL LAYAKYAVYG LGYKPTSEPD FVEKSVISRS 501: VMLMSYLRLR LILELMELFQ GMKKLKHTIY GFYGQLVGGI TNSVKRITCS V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)