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AT1G65900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK3UeggNOG:ENOG410ZYB0EMBL:AY049257EMBL:AY090277EMBL:CP002684EnsemblPlants:AT1G65900EnsemblPlants:AT1G65900.1
entrez:842902GeneID:842902Gramene:AT1G65900.1hmmpanther:PTHR38360hmmpanther:PTHR38360:SF1KEGG:ath:AT1G65900OMA:AEWIKFL
PhylomeDB:Q94A98Proteomes:UP000006548RefSeq:NP_564864.1STRING:3702.AT1G65900.1SUPFAM:SSF53807TAIR:AT1G65900UniGene:At.23275
UniProt:Q94A98
Coordinates (TAIR10) chr1:-:24516023..24518325
Molecular Weight (calculated) 45217.80 Da
IEP (calculated) 5.08
GRAVY (calculated) -0.09
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPLPYSSWP LILLLVLWCM VARLSNGASN NVKVGIISKV EDATNFHIYY GQTFKVIKNA IDGKSYLLIQ NTSRMAVRTK YCTSRIKSYV IPLLNYSLDT
101: QSSQGSVPVS FFELLGLLGS LKGITSDEVV SPCLLKLCEA GEVVKLDKGE QLSQFAAHFI SDTDQPQTCN FANFFPLSEG TPLQRAEWIK FLGAFTNLET
201: KANQVYDSVK ASYTCLSQMA ANKTKSFKPI VAWMGYDQNG GMWSFTKESH KLKFVEDAGG ENIDKSINKV SYNVSDPDDL EALHAILCTV DAVIDETLSS
301: DPQNYTQTTF LANINVDDNS CFAFLANQSI WRYDKRVRNR TTLDWYDGAI SQPNLVLADI VEALFPTGNY TTSYFRNIAK GEGVINISPD MCDRDASLPL
401: VPSIPACG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)