AT1G65670.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.972 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 702, subfamily A, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
a member of the cytochrome P450 gene family. molecular function unknown. | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 702, subfamily A, polypeptide 1 (CYP702A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 702, subfamily A, polypeptide 2 (TAIR:AT4G15300.1); Has 23293 Blast hits to 23240 proteins in 1360 species: Archae - 56; Bacteria - 2869; Metazoa - 9625; Fungi - 3612; Plants - 6281; Viruses - 3; Other Eukaryotes - 847 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:24421993..24423953 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55131.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 482 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVEVYELLTV MVSLIVVKLF HWIYQSKNPK PNEKLPPGSM GFPIIGETFE FMKPHDAFQF PTFIKERIIR YGPIFRTSLF GAKVIISTDI ELNMEIAKTN 101: HAPGLTKSIA QLFGENNLFF QSKESHKHVR NLTFQLLGSQ GLKLSVMQDI DLLTRTHMEE GARRGCLDVK EISSKILIEC LAKKVTGDME PEAAKELALC 201: WRCFPSGWFR FPLNLPGTGV YKMMKARKRM LHLLKETILK KRASGEELGE FFKIIFEGAE TMSVDNAIEY IYTLFLLANE TTPRILAATI KLISDNPKVM 301: KELHREHEGI VRGKTEKETS ITWEEYKSMT FTQMVINESL RITSTAPTVF RIFDHEFQVG SYKIPAGWIF MGYPNNHFNP KTYDDPLVFN PWRWEGKDLG 401: AIVSRTYIPF GAGSRQCVGA EFAKLQMAIF IHHLSRDRWS MKIGTTILRN FVLMFPNGCE VQFLKDTEVD NSSGSNPDCC NG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)