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AT1G65610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Six-hairpin glycosidases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G65610-MONOMERCAZy:GH9EC:3.2.1.4eggNOG:ENOG410IK7U
eggNOG:ENOG410YBAVEMBL:AC001229EMBL:AK229402EMBL:CP002684
EnsemblPlants:AT1G65610EnsemblPlants:AT1G65610.1entrez:842872Gene3D:1.50.10.10
GeneID:842872Genevisible:O04478GO:GO:0008810GO:GO:0016021
GO:GO:0030245GO:GO:0071555Gramene:AT1G65610.1gramene_pathway:3.2.1.4
gramene_pathway:PWY-1001hmmpanther:PTHR22298hmmpanther:PTHR22298:SF39HOGENOM:HOG000021033
InParanoid:O04478InterPro:IPR001701InterPro:IPR008928InterPro:IPR012341
InterPro:IPR018221InterPro:IPR033126KEGG:00500+3.2.1.4KEGG:ath:AT1G65610
OMA:TYIQFATPaxDb:O04478Pfam:O04478Pfam:PF00759
PhylomeDB:O04478PIR:B96681PRIDE:O04478PRO:PR:O04478
PROSITE:PS00592PROSITE:PS00698ProteinModelPortal:O04478Proteomes:UP000006548
RefSeq:NP_176738.1scanprosite:PS00592scanprosite:PS00698SMR:O04478
STRING:3702.AT1G65610.1SUPFAM:SSF48208TAIR:AT1G65610tair10-symbols:ATGH9A2
tair10-symbols:KOR2TMHMM:TMhelixUniGene:At.35864UniProt:O04478
Coordinates (TAIR10) chr1:-:24391823..24395261
Molecular Weight (calculated) 69840.00 Da
IEP (calculated) 9.67
GRAVY (calculated) -0.47
Length 623 amino acids
Sequence (TAIR10)
(BLAST)
001: MHPGNVWGGS LDAVDSDRIA AEEEERLRNT TEWDRGAIHS QRSELDETQQ GWLLAPQDNW RKKKKKYVNL GCVSVSRTVF LWTVGSIAVL FLVVALPIII
101: VKSLPRHKSA PPPPDNYTLA LHKALQFFDA QKSGKLPKKN KVSWRGDSGT KDGLPDVVGG LVGGYYDGGS NVKFHFPMAF SMTMLSWSLI EYSHKYKAID
201: EYDHMRDVLK WGTDYLLLTF NNSATRLDHI YTQVGGGLRD SESPDDIYCW QKPEDMSYDR PVLSSTSAAD LGAEVSAALA AASIVFTDKP DYAKKLKKGA
301: ETLYPFFRSK SRRKRYSDGQ PTAQAFYNST SMFDEFMWAG AWLYYATGNK TYIQFATTPS VPQTAKAFAN RPELMVPSWN NKLPGAMLLM TRYRLFLNPG
401: FPYENMLNRY HNATGITMCA YLKQYNVFNR TSGGLMQLNL GKPRPLEYVA HASFLASLFA DYLNSTGVPG WYCGPTFVEN HVLKDFAQSQ IDYILGDNPL
501: KMSYVVGFGK KFPRRVHHRG ATIPNDKKRR SCREGLKYRD TKNPNPNNIT GAMVGGPNKF DEFHDLRNNY NASEPTLSGN AGLVAALVSL TSSGGQQIDK
601: NTMFNSVPPL YSPTPPPPKA WKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)