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AT1G65510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
no data
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65486.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS1HeggNOG:ENOG4111CWWEMBL:BT015104EMBL:CP002684EnsemblPlants:AT1G65510EnsemblPlants:AT1G65510.1entrez:842863
GeneID:842863Gramene:AT1G65510.1HOGENOM:HOG000064642KEGG:ath:AT1G65510OMA:CKRPPRTPhylomeDB:Q6DBB8Proteomes:UP000006548
RefSeq:NP_176729.1TAIR:AT1G65510TMHMM:TMhelixUniGene:At.47723UniProt:Q6DBB8
Coordinates (TAIR10) chr1:+:24359456..24359847
Molecular Weight (calculated) 8553.45 Da
IEP (calculated) 11.70
GRAVY (calculated) -0.15
Length 80 amino acids
Sequence (TAIR10)
(BLAST)
1: MGSKTSTNMV ALLLSLLILI FTLSSQVKVV EATSRKLANG RPIVWTPASR SCGASHASWK KNNGPCKRPP RTAPASYNSP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)