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AT1G65450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2085 Blast hits to 2084 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 33; Plants - 2050; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G65450-MONOMERDNASU:842857eggNOG:ENOG410II90eggNOG:ENOG4111F55EMBL:AC004512EMBL:CP002684EnsemblPlants:AT1G65450
EnsemblPlants:AT1G65450.1entrez:842857ExpressionAtlas:O80816Gene3D:3.30.559.10GeneID:842857GO:GO:0016747Gramene:AT1G65450.1
hmmpanther:PTHR31642hmmpanther:PTHR31642:SF40HOGENOM:HOG000006467InterPro:IPR003480InterPro:IPR023213OMA:KGFPHGEPfam:PF02458
PIR:T02368Proteomes:UP000006548RefSeq:NP_564853.2SMR:O80816STRING:3702.AT1G65450.1SUPFAM:SSF52777TAIR:AT1G65450
UniGene:At.35884UniProt:O80816
Coordinates (TAIR10) chr1:+:24315875..24318895
Molecular Weight (calculated) 50508.10 Da
IEP (calculated) 5.00
GRAVY (calculated) -0.25
Length 450 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSYQESPP LLLEDLKVTI KESTLIFPSE ETSERKSMFL SNVDQILNFD VQTVHFFRPN KEFPPEMVSE KLRKALVKLM DAYEFLAGRL RVDPSSGRLD
101: VDCNGAGAGF VTAASDYTLE ELGDLVYPNP AFAQLVTSQL QSLPKDDQPL FVFQITSFKC GGFAMGISTN HTTFDGLSFK TFLENLASLL HEKPLSTPPC
201: NDRTLLKARD PPSVAFPHHE LVKFQDCETT TVFEATSEHL DFKIFKLSSE QIKKLKERAS ETSNGNVRVT GFNVVTALVW RCKALSVAAE EGEETNLERE
301: STILYAVDIR GRLNPELPPS YTGNAVLTAY AKEKCKALLE EPFGRIVEMV GEGSKRITDE YARSAIDWGE LYKGFPHGEV LVSSWWKLGF AEVEYPWGKP
401: KYSCPVVYHR KDIVLLFPDI DGDSKGVYVL AALPSKEMSK FQHWFEDTLC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)