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AT1G65430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : IBR domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARIADNE 8 (ARI8); FUNCTIONS IN: ubiquitin-protein ligase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 2973 Blast hits to 2950 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1311; Fungi - 559; Plants - 644; Viruses - 3; Other Eukaryotes - 456 (source: NCBI BLink).
Protein Annotations
BioGrid:28075EC:6.3.2.-eggNOG:ENOG410XP9YeggNOG:KOG1815EMBL:AC004512EMBL:AF528630EMBL:AF528631
EMBL:AF528632EMBL:AF528633EMBL:AF528634EMBL:AF528635EMBL:AF528636EMBL:AF528637EMBL:AF528638
EMBL:AJ510211EMBL:AY062808EMBL:AY128748EMBL:CP002684EMBL:DQ086843EnsemblPlants:AT1G65430EnsemblPlants:AT1G65430.1
entrez:842854Gene3D:3.30.40.10GeneID:842854Genevisible:Q8W468GO:GO:0000151GO:GO:0000209GO:GO:0003676
GO:GO:0004842GO:GO:0005737GO:GO:0008270GO:GO:0016874GO:GO:0031624GO:GO:0032436GO:GO:0042787
GO:GO:0061630Gramene:AT1G65430.1hmmpanther:PTHR11685hmmpanther:PTHR11685:SF135HOGENOM:HOG000243301InParanoid:Q8W468IntAct:Q8W468
InterPro:IPR001841InterPro:IPR001876InterPro:IPR002867InterPro:IPR013083InterPro:IPR031127KEGG:ath:AT1G65430KO:K11968
OMA:KSATICQPANTHER:PTHR11685PaxDb:Q8W468Pfam:PF01485Pfam:Q8W468Pfscan:PS50089Pfscan:PS50199
PhylomeDB:Q8W468PIR:T02366PRIDE:Q8W468PRO:PR:Q8W468PROSITE:PS01358PROSITE:PS50089PROSITE:PS50199
ProteinModelPortal:Q8W468Proteomes:UP000006548RefSeq:NP_176722.2scanprosite:PS01358SMART:SM00547SMART:SM00647SMR:Q8W468
STRING:3702.AT1G65430.1SUPFAM:SSF57850SUPFAM:SSF90209TAIR:AT1G65430tair10-symbols:ARI8tair10-symbols:ATARI8UniGene:At.27225
UniPathway:UPA00143UniProt:Q8W468
Coordinates (TAIR10) chr1:-:24301165..24306159
Molecular Weight (calculated) 64757.00 Da
IEP (calculated) 4.66
GRAVY (calculated) -0.66
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)