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AT1G65295.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1U9eggNOG:ENOG410Y0EYEMBL:BT000876EMBL:CP002684EnsemblPlants:AT1G65295EnsemblPlants:AT1G65295.1entrez:842837
GeneID:842837Gramene:AT1G65295.1hmmpanther:PTHR33786hmmpanther:PTHR33786:SF2HOGENOM:HOG000238611KEGG:ath:AT1G65295OMA:MNETRRK
PhylomeDB:Q8H130Proteomes:UP000006548RefSeq:NP_564848.1TAIR:AT1G65295TMHMM:TMhelixUniGene:At.22751UniProt:Q8H130
Coordinates (TAIR10) chr1:+:24251567..24252054
Molecular Weight (calculated) 12732.80 Da
IEP (calculated) 7.05
GRAVY (calculated) 0.30
Length 115 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTLEESKIS IVFLLLLLFS IFISSSHQAN EVLPAEGDNE MMMVPLGEEK FMVMNETRRK LGSFQICSVC TCCGGAKGLC LPSPCCYAIN CNIPNRPFGY
101: CSFTPKTCNC FGCHI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)