AT1G64940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.971 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 87, subfamily A, polypeptide 6 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP89A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 87, subfamily A, polypeptide 6 (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24123789..24125324 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59281.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.30 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 511 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIWLLILGS LFLSLLVNHL LFRRRDSFSS LPLPPDPNFF PFIGTLKWLR KGLGGLDNYL RSVHHHLGPI ITLRITSRPA IFVTDRSLAH QALVLNGAVF 101: ADRPPAESIS KIISSNQHNI SSCLYGATWR LLRRNLTSEI LHPSRLRSYS HARRWVLEIL FGRFGKNRGE EPIVVVDHLH YAMFALLVLM CFGDKLDEKQ 201: IKQVEYVQRR QLLGFSRFNI LTLWPKFTKL IYRKRWEEFF QMQSEQQDVL LPLIRARRKI VDERKKRSSE EEKDNKEYVQ SYVDTLLDVE LPDEKRKLNE 301: DEIVSLCSEF LNAGTDTTAT ALQWIMANLV KNPEIQRRLY EEIKSIVGEE AKEVEEQDAQ KMPYLKAVVM EGLRRHPPGH FVLPHSVTED TVLGGYKVPK 401: KGTINFMVAE IGRDPKVWEE PMAFKPERFM EEAVDITGSR GIKMMPFGAG RRICPGIGLA MLHLEYYVAN MVREFEWQEV QGHEVDLTEK LEFTVVMKHP 501: LKALAVPRRS H |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)