AT1G64910.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.558 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 5612 Blast hits to 5577 proteins in 265 species: Archae - 0; Bacteria - 72; Metazoa - 916; Fungi - 16; Plants - 4581; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:24115324..24116667 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50387.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.30 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||
| Length | 447 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGQTFHAFMF PWFAFGHMTP YLHLANKLAE RGHRITFLIP KKAQKQLEHL NLFPDSIVFH SLTIPHVDGL PAGAETFSDI PMPLWKFLPP AIDLTRDQVE 101: AAVSALSPDL ILFDIASWVP EVAKEYRVKS MLYNIISATS IAHDFVPGGE LGVPPPGYPS SKLLYRKHDA HALLSFSVYY KRFSHRLITG LMNCDFISIR 201: TCKEIEGKFC EYLERQYHKK VFLTGPMLPE PNKGKPLEDR WSHWLNGFEQ GSVVFCALGS QVTLEKDQFQ ELCLGIELTG LPFFVAVTPP KGAKTIQDAL 301: PEGFEERVKD RGVVLGEWVQ QPLLLAHPSV GCFLSHCGFG SMWESIMSDC QIVLLPFLAD QVLNTRLMTE ELKVSVEVQR EETGWFSKES LSVAITSVMD 401: QASEIGNLVR RNHSKLKEVL VSDGLLTGYT DKFVDTLENL VSETKRE |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)