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AT1G64890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.916
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G04570.1); Has 1088 Blast hits to 1079 proteins in 365 species: Archae - 17; Bacteria - 560; Metazoa - 42; Fungi - 5; Plants - 247; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGJTeggNOG:ENOG410XRKZEMBL:AC006193EMBL:AK117235EMBL:AY046018EMBL:BT002319EMBL:CP002684
EnsemblPlants:AT1G64890EnsemblPlants:AT1G64890.1entrez:842797GeneID:842797Genevisible:Q9XIQ7GO:GO:0006810GO:GO:0016021
Gramene:AT1G64890.1hmmpanther:PTHR31585hmmpanther:PTHR31585:SF2HOGENOM:HOG000237705InParanoid:Q9XIQ7InterPro:IPR004324InterPro:IPR020846
KEGG:ath:AT1G64890OMA:HRRLPYVPaxDb:Q9XIQ7Pfam:PF03092Pfam:Q9XIQ7PhylomeDB:Q9XIQ7PIR:C96672
PRIDE:Q9XIQ7PRO:PR:Q9XIQ7ProteinModelPortal:Q9XIQ7Proteomes:UP000006548RefSeq:NP_564843.1STRING:3702.AT1G64890.1SUPFAM:SSF103473
TAIR:AT1G64890TCDB:2.A.71.3.1TMHMM:TMhelixUniGene:At.14815UniGene:At.71486UniProt:Q9XIQ7
Coordinates (TAIR10) chr1:+:24109752..24111165
Molecular Weight (calculated) 48488.70 Da
IEP (calculated) 9.38
GRAVY (calculated) 0.58
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSSDTHAG ESRHRRNPIR WLLGFGFFVQ GFRGFPWLGA NFFLTEQLRV NPSVLQLLQN SANLPMVAKP IYGVVSDSVY FFGQHRIPYI AVGALLQAIS
101: WLAIAFLSRS NVSILALSIY LLLSNLGASL VEVANDAIVA ESGKQKTSET QSGELPSFVW MVSSLGGILG NLLGGIAIKT FSAQSTFLVF GILALLQFLV
201: TINIREKSLN LPENPSPAGG IRKHLSDLSH VLRKPEISYS IAWIAVSTAV VPVLTGTMFF YQTKFLKIDA SLLGISKVFG QIAMLLWGFA YNRWLKAMRP
301: RKLLTAIQVT IAFFVISDLL FVKGVYRDLG VSDSVYVLFF SGFLETLFYF KILPFTVLMA RLCPPGCEGS LMAFVMSAIA LAFIVSGYLG IVLASFVGVT
401: EDDFSGFTRG LAIEACCVGI PLILTSWIYD EAETKEKSKK IE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)