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AT1G64700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.633
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYV6eggNOG:ENOG411140XEMBL:AC006193EMBL:AC009519
EMBL:BT010669EMBL:BT010968EMBL:CP002684EnsemblPlants:AT1G64700
EnsemblPlants:AT1G64700.1entrez:842778GeneID:842778Gramene:AT1G64700.1
hmmpanther:PTHR33148hmmpanther:PTHR33148:SF10HOGENOM:HOG000090453InterPro:IPR025322
KEGG:ath:AT1G64700OMA:TPYRMSLPfam:PF14009PhylomeDB:Q9XIS1
PIR:B96670Proteomes:UP000006548RefSeq:NP_176651.1TAIR:AT1G64700
UniGene:At.35970UniGene:At.75592UniProt:Q9XIS1
Coordinates (TAIR10) chr1:-:24039931..24040542
Molecular Weight (calculated) 22684.90 Da
IEP (calculated) 8.24
GRAVY (calculated) -0.27
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)