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AT1G64680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK19eggNOG:ENOG410XQY4EMBL:AC009519EMBL:AK226297EMBL:BT010194EMBL:CP002684EnsemblPlants:AT1G64680
EnsemblPlants:AT1G64680.1entrez:842776GeneID:842776GO:GO:0009534GO:GO:0009941Gramene:AT1G64680.1hmmpanther:PTHR33591
hmmpanther:PTHR33591:SF1HOGENOM:HOG000242549InterPro:IPR025114KEGG:00906+5.2.1.14KEGG:ath:AT1G64680OMA:AVWEWDYPfam:PF13225
PhylomeDB:Q9SGU7PIR:H96669Proteomes:UP000006548RefSeq:NP_564838.1STRING:3702.AT1G64680.1TAIR:AT1G64680UniGene:At.28247
UniProt:Q9SGU7
Coordinates (TAIR10) chr1:+:24036071..24037062
Molecular Weight (calculated) 28164.20 Da
IEP (calculated) 8.31
GRAVY (calculated) -0.33
Length 250 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)