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AT1G64640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.532
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : early nodulin-like protein 8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 8 (ENODL8); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 1336 Blast hits to 1294 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1335; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXW0eggNOG:ENOG410YR23EMBL:BT012210EMBL:BT012397EMBL:CP002684EnsemblPlants:AT1G64640EnsemblPlants:AT1G64640.1
entrez:842772Gene3D:2.60.40.420GeneID:842772GO:GO:0009055GO:GO:0031225GO:GO:0046658Gramene:AT1G64640.1
hmmpanther:PTHR33021hmmpanther:PTHR33021:SF44HOGENOM:HOG000239663InterPro:IPR003245InterPro:IPR008972KEGG:ath:AT1G64640OMA:MNDGNSL
Pfam:PF02298Pfscan:PS51485PhylomeDB:Q6NLD7ProDom:PD003122PROSITE:PS51485Proteomes:UP000006548RefSeq:NP_176645.3
SMR:Q6NLD7STRING:3702.AT1G64640.1SUPFAM:SSF49503TAIR:AT1G64640tair10-symbols:AtENODL8tair10-symbols:ENODL8UniGene:At.43626
UniGene:At.71093UniProt:Q6NLD7
Coordinates (TAIR10) chr1:-:24022482..24023151
Molecular Weight (calculated) 20252.30 Da
IEP (calculated) 7.33
GRAVY (calculated) 0.22
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVMSLSKTM VVVVLQVMIL LGQEIGKVSS TLYKVGDLDA WGIPIDAKVY SKWPKSHSFK IGDSLLFLYP PSEDSLIQVT PSNFKSCNTK DPILYMNDGN
101: SLFNLTQNGT LYFTSANPGH CTKYQKLLVS VGTYSAEAEA LSPSSAADAP SYQNAFGSIP LSQKSSASSS LISAFSTVAA SLACAVVGAI M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)