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AT1G64500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.771
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111HAIeggNOG:KOG2824EMBL:AC009519EMBL:AY056260EMBL:BT002750EMBL:CP002684EnsemblPlants:AT1G64500
EnsemblPlants:AT1G64500.1entrez:842758Gene3D:3.40.30.10GeneID:842758GO:GO:0005884GO:GO:0009055GO:GO:0009902
GO:GO:0015035GO:GO:0045454GO:GO:0051017Gramene:AT1G64500.1hmmpanther:PTHR10168hmmpanther:PTHR10168:SF61InterPro:IPR002109
InterPro:IPR012336KEGG:ath:AT1G64500KO:K17479OMA:VEEPWLIPfam:PF00462Pfscan:PS51354PhylomeDB:Q9SGW5
PIR:G96668PROSITE:PS51354Proteomes:UP000006548RefSeq:NP_176631.1STRING:3702.AT1G64500.1SUPFAM:SSF52833TAIR:AT1G64500
UniGene:At.19656UniProt:Q9SGW5
Coordinates (TAIR10) chr1:+:23953270..23954376
Molecular Weight (calculated) 41018.50 Da
IEP (calculated) 5.48
GRAVY (calculated) -0.70
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)