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AT1G64370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 773 Blast hits to 375 proteins in 118 species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi - 108; Plants - 31; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXPMeggNOG:ENOG41103SZEMBL:AC066689EMBL:AF083729EMBL:AY065353EMBL:AY088704EMBL:AY096689
EMBL:CP002684EnsemblPlants:AT1G64370EnsemblPlants:AT1G64370.1entrez:842744GeneID:842744Gramene:AT1G64370.1HOGENOM:HOG000152197
KEGG:ath:AT1G64370OMA:GMFINNGPIR:G96667Proteomes:UP000006548RefSeq:NP_564833.1STRING:3702.AT1G64370.1TAIR:AT1G64370
UniGene:At.24253UniProt:Q9C7W1
Coordinates (TAIR10) chr1:+:23888967..23889503
Molecular Weight (calculated) 19698.30 Da
IEP (calculated) 10.04
GRAVY (calculated) -1.63
Length 178 amino acids
Sequence (TAIR10)
(BLAST)
001: MQYYENREKD YYEVAQGQRN GYGQSQSHNH EGYGQSQSRG GYGQIHNREG YNQNREGYSQ SQSRPVYGLS PTLNHRSHGG FLDGLFKGQN GQKGQSGLGT
101: FLGQHKSQEA KKSQGHGKLL GQHDQKKTHE TNSGLNGLGM FINNGEKKHR RKSEHKKKNK DGHGSGNESG SSSGSDSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)