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AT1G64355.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410INEEeggNOG:ENOG4111TVWEMBL:AY075674EMBL:BT024591EMBL:CP002684EnsemblPlants:AT1G64355EnsemblPlants:AT1G64355.1
entrez:842742ExpressionAtlas:Q8S9I8GeneID:842742GO:GO:0016021Gramene:AT1G64355.1hmmpanther:PTHR35473hmmpanther:PTHR35473:SF2
HOGENOM:HOG000232830InterPro:IPR021995OMA:DDKLGNDPfam:PF12159PhylomeDB:Q8S9I8Proteomes:UP000006548RefSeq:NP_564831.2
STRING:3702.AT1G64355.1TAIR:AT1G64355TMHMM:TMhelixUniGene:At.36009UniProt:Q8S9I8
Coordinates (TAIR10) chr1:+:23886152..23886987
Molecular Weight (calculated) 21865.10 Da
IEP (calculated) 8.43
GRAVY (calculated) 0.07
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MILINSNSPT LISAVRFVGS SPFTTRGLSQ STVSISRNKS FFFHFTETKE KNARRDYLRV SIVCDAGGMF PVDPWAPTID SQSIASQLFA VSLFPYIGFL
101: YFLTKSKSAP KLTLFGFYFL LAFVGATIPA GIYAKVHYGT SLSNVDWLHG GAESLLALTN LFIVLGLRQA LRKSQDDDDD KLGNDDEVPT TQEQGKSSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)