AT1G64330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interactive protein 1 (TAIR:AT5G41790.1); Has 217439 Blast hits to 106017 proteins in 3642 species: Archae - 3189; Bacteria - 45762; Metazoa - 90441; Fungi - 17255; Plants - 11343; Viruses - 888; Other Eukaryotes - 48561 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23872172..23873970 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64498.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.82 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.09 | ||||||||||||||||||||||||||||||||
| Length | 555 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRKLSIRDSL KSFFEPHLHP DNGESLKGTK TEIDEKVKKI LGIVESGDIE EDESKRLVVA ELVKDFYKEY ESLYHQYDDL TGEIRKKVHG KGENDSSSSS 101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL 201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD 301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH 401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE 501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)