AT1G64320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G41780.1); Has 120676 Blast hits to 61544 proteins in 2785 species: Archae - 1971; Bacteria - 17622; Metazoa - 55572; Fungi - 10250; Plants - 6487; Viruses - 441; Other Eukaryotes - 28333 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23869036..23870548 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 55491.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.98 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.97 | ||||||||||||||||||||||||
| Length | 476 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKATESKQLG EKNKGLRSQI SGLESVLKEK GDEISTLVNK FGNSELGLTS RIEDLKCQLK NLEQEIGFLR ARNAGLAGNL EVTKVEEKER VKGLMDQVNG 101: MKHELESLRS QKDESEAKLE KKVEEVTETK MQLKSLKEET EEERNRLSEE IDQLKGENQM LHRRISELDS LHMEMKTKSA HEMEDASKKL DTEVSDQKKL 201: VKEQDDIIRR LSAKIKDQQR LLKEQKDTID KFAEDQKQSK RWSFGSSRDL KLNPNALERK MEELAEDFRM KIEDHIRILY RRIHVAEQIH LESKNEYIKT 301: RDMLKENKEN RESLMFFETQ FNKMKDALEK GYTGSETAMK KLEEAEEVTN RVARIGKEME SAKLWVSEKK SEVETLTAKL ECSEAQETLL KEKLSKLEKK 401: LAEEGTEKLK LAKVLSKFET RIKELEVKVK GREVELLSLG EEKREAIRQL CILVDYHQDR YNQLKKSILK VDDLKT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)