AT1G64180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : intracellular protein transport protein USO1-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
intracellular protein transport protein USO1-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41620.1); Has 2997 Blast hits to 2464 proteins in 355 species: Archae - 17; Bacteria - 245; Metazoa - 1676; Fungi - 267; Plants - 224; Viruses - 17; Other Eukaryotes - 551 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23821640..23824193 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67943.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.25 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.07 | ||||||||||||||||||||||||||||
| Length | 593 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSKEEEEEE EEEDDGGEGQ KGKRFIEKLR RRAVFVGHRS VFRRPSTPVH ISFNPNKNPS SASSRKLAAS LWEFYQYYDN DHLIHPPAAT KMHRAPLGSA 101: GPSNSRRLRH GHGKAAVADN NGIELTDHQP ESAGSIRRQI GQMLMKHHHL TERNDHALQP VSPTSYDSSL EFRGRRRAGE PNNNIKTSTE LLKVLNRIWI 201: LEEQHSANIS LIKSLKTELA HSRARIKDLL RCKQADKRDM DDFVKQLAEE KLSKGTKEHD RLSSAVQSLE DERKLRKRSE SLYRKLAQEL SEVKSTLSNC 301: VKEMERGTES KKILERLCDE FAKGIKSYER EIHGLKQKLD KNWKGWDEQD HMILCIAESW LDERIQSGNG SALEKLEFEI ETFLKTNQNA DSNEIARNRR 401: TSLESVPFNA MSAPIWEVDR EEEEDSGGSG SNCFELKKHG SDVAKPPRGD ETEKPELIKV GVSERPQRRS QSPSSLQVKF EDQMAWAMSS NEKKKTRANE 501: MEPETEKCGK ETNNVVGEMI RTHRRLSSET REIDEASCSY PSRRRESPIR QWNTRTVTPD LGAPRGVKDN TLKTKLSEAR TTSSRPRVRL FKD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)