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AT1G63770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peptidase M1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7682 Blast hits to 7653 proteins in 1759 species: Archae - 112; Bacteria - 3674; Metazoa - 1678; Fungi - 451; Plants - 221; Viruses - 0; Other Eukaryotes - 1546 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0308eggNOG:KOG1046EMBL:CP002684EnsemblPlants:AT1G63770EnsemblPlants:AT1G63770.1entrez:842681ExpressionAtlas:F4I3R4
Gene3D:1.25.50.10GeneID:842681GO:GO:0008237GO:GO:0008270Gramene:AT1G63770.1hmmpanther:PTHR11533hmmpanther:PTHR11533:SF152
InterPro:IPR001930InterPro:IPR012779InterPro:IPR014782InterPro:IPR024601PANTHER:PTHR11533PaxDb:F4I3R4Pfam:PF01433
Pfam:PF11940PRIDE:F4I3R4PRINTS:PR00756ProteinModelPortal:F4I3R4Proteomes:UP000006548RefSeq:NP_176563.3SMR:F4I3R4
STRING:3702.AT1G63770.5SUPFAM:0038696SUPFAM:SSF55486TAIR:AT1G63770TIGRfam:TIGR02414TIGRFAMs:TIGR02414UniGene:At.45960
UniGene:At.73057UniProt:F4I3R4
Coordinates (TAIR10) chr1:-:23658250..23664243
Molecular Weight (calculated) 103471.00 Da
IEP (calculated) 6.48
GRAVY (calculated) -0.27
Length 918 amino acids
Sequence (TAIR10)
(BLAST)
001: MARLIIPCRS SSLARVNLLG LLSRAPVPVR SSCLRSSANR LTQHRPFLTS EAICLRKNRF LPHSVDTHKQ NSRRLICSVA TESVPDKAED SKMDAPKEIF
101: LKNYTKPDYY FETVDLSFSL GEEKTIVSSK IKVSPRVKGS SAALVLDGHD LKLLSVKVEG KLLKEGDYQL DSRHLTLPSL PAEESFVLEI DTEIYPHKNT
201: SLEGLYKSSG NFCTQCEAEG FRKITFYQDR PDIMAKYTCR VEGDKTLYPV LLSNGNLISQ GDIEGGRHYA LWEDPFKKPC YLFALVAGQL VSRDDTFTTR
301: SGRQVSLKIW TPAEDLPKTA HAMYSLKAAM KWDEDVFGLE YDLDLFNIVA VPDFNMGAME NKSLNIFNSK LVLASPETAT DADYAAILGV IGHEYFHNWT
401: GNRVTCRDWF QLSLKEGLTV FRDQEFSSDM GSRTVKRIAD VSKLRIYQFP QDAGPMAHPV RPHSYIKVYE KVWLFTNSVL LYAGAEVVRM YKTLLGTQGF
501: RKGIDLYFER HDEQAVTCED FFAAMRDANN ADFANFLQWY SQAGTPVVKV VSSYNADART FSLKFSQEIP PTPGQPTKEP TFIPVVVGLL DSSGKDITLS
601: SVHHDGTVQT ISGSSTILRV TKKEEEFVFS DIPERPVPSL FRGFSAPVRV ETDLSNDDLF FLLAHDSDEF NRWEAGQVLA RKLMLNLVSD FQQNKPLALN
701: PKFVQGLGSV LSDSSLDKEF IAKAITLPGE GEIMDMMAVA DPDAVHAVRK FVRKQLASEL KEELLKIVEN NRSTEAYVFD HSNMARRALK NTALAYLASL
801: EDPAYMELAL NEYKMATNLT DQFAALAALS QNPGKTRDDI LADFYNKWQD DYLVVNKWFL LQSTSDIPGN VENVKKLLDH PAFDLRNPNK ASLFAYWRVL
901: RFPSEFPCQG WIRLQVLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)