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AT1G63680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26987276 (2016): plastid
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:20061580 (2010): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases
Curator
Summary (TAIR10)
Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis.
Computational
Description (TAIR10)
MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0769eggNOG:ENOG410IGJPEMBL:CP002684EnsemblPlants:AT1G63680EnsemblPlants:AT1G63680.1entrez:842672Gene3D:3.40.1190.10
Gene3D:3.40.1390.10Gene3D:3.90.190.20GeneID:842672GO:GO:0005524GO:GO:0008360GO:GO:0009058GO:GO:0009295
GO:GO:0009507GO:GO:0009658GO:GO:0010020GO:GO:0016881GO:GO:0051301Gramene:AT1G63680.1gramene_plant_reactome:1119436
gramene_plant_reactome:1119523gramene_plant_reactome:1119617gramene_plant_reactome:6873445gramene_plant_reactome:6875809gramene_plant_reactome:6875810gramene_plant_reactome:6875860gramene_plant_reactome:6875932
gramene_plant_reactome:6876134gramene_plant_reactome:6876675HAMAP:MF_00208hmmpanther:PTHR23135hmmpanther:PTHR23135:SF16InParanoid:F4I3P9InterPro:IPR000713
InterPro:IPR004101InterPro:IPR005761InterPro:IPR013221iPTMnet:F4I3P9KEGG:ath:AT1G63680OMA:VIGCEGEPaxDb:F4I3P9
Pfam:PF01225Pfam:PF02875Pfam:PF08245PRIDE:F4I3P9ProteinModelPortal:F4I3P9Proteomes:UP000006548RefSeq:NP_176555.4
SMR:F4I3P9STRING:3702.AT1G63680.1SUPFAM:SSF53244SUPFAM:SSF53623SUPFAM:SSF63418TAIR:AT1G63680tair10-symbols:ATMURE
tair10-symbols:MUREtair10-symbols:PDE316TIGRfam:TIGR01085TIGRFAMs:TIGR01085UniGene:At.36093UniProt:F4I3P9
Coordinates (TAIR10) chr1:+:23614461..23617247
Molecular Weight (calculated) 85591.30 Da
IEP (calculated) 4.30
GRAVY (calculated) -0.42
Length 772 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFTFLSPHP VFLSLTGTTS SFSYKPVLLP FSRNSRTLTV AAGPARRNSY PNPADDDPPE APEDSMHGVS KFQQIQRQAA RARKLEEEDF EKNRNTYLSA
101: IADVEDAAET GRDDEESGGD LFSDIDRAIS MKRSEFVKQG LLKPNPPKTA SLKKIGEEGN EEEGDVTDDV DELDEEEVVD LDEIDKLTGL TEISDEEDWV
201: DEEGNTRINK KKEFGSDHQF EFDLDDFGES KARIVEPKFK MCLAELLDES KVVPISVYGD LDVEITGIQH DSRGVSAGDL FVCCLGSENF LSEADKRGAV
301: AVVASKEIDI EDTLGCRALV IVEDTNAVLA ALASSFYRHP SKNMSVIGVT GTDGKTTTTY LIKSLYEAMG VRTGMFSTVS CYIHGDNKLD TPNATMNPDA
401: VLVQSLMAKM LHNGTESLVM EASPQELALG KCDEVDFDIA VFTNLTRENT DFRGTDEEYR DAEAKLFSRM VDPERHRKVV NIDDPNAAFF VQQGNPNVPV
501: VTFAMENTKA DVHPLKFELS LFETQVLVNT PQGILEISSG LLGRHNIYNI LAAVAVGIAV GAPLEDIVRG VEEVDAVPGR CELIDEEQAF GVIVDHANTP
601: DGLSRLLDSI RELKPRRIIT VIGCEGENER GKRPLMTKIA TEKSDVTMLT SDNPRNEDPL DILDDMLSGI GWTMQEYLKH GEHDYYPPLA NGHRLFLHDI
701: RRVAVRCAVA MGEEGDMVVV AGKGHEAYQL EGEKKEFYDD REECREALQY VDELHQAGID TSEFPWRLPE SH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)