suba logo
AT1G63660.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.724
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30961429 (2019): nucleus
  • PMID:30394608 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, catalytic activity, GMP synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: in 7 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), GMP synthase, C-terminal (InterPro:IPR001674), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 20887 Blast hits to 20751 proteins in 2946 species: Archae - 738; Bacteria - 12164; Metazoa - 273; Fungi - 298; Plants - 185; Viruses - 0; Other Eukaryotes - 7229 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G63660-MONOMERBioCyc:ARA:GQT-1182-MONOMEReggNOG:COG0518eggNOG:COG0519
eggNOG:ENOG410JSA4eggNOG:KOG1622EMBL:AC011622EMBL:BT020358
EMBL:CP002684EnsemblPlants:AT1G63660EnsemblPlants:AT1G63660.1entrez:842670
ExpressionAtlas:Q9CAD1Gene3D:3.40.50.620Gene3D:3.40.50.880GeneID:842670
GO:GO:0003922GO:GO:0005524GO:GO:0005829GO:GO:0006177
GO:GO:0006541GO:GO:0016462GO:GO:0016740Gramene:AT1G63660.1
gramene_pathway:6.3.5.2gramene_pathway:DENOVOPURINE3-PWYgramene_pathway:PWY-841HAMAP:MF_00344
hmmpanther:PTHR11922hmmpanther:PTHR11922:SF2InterPro:IPR001674InterPro:IPR004739
InterPro:IPR014729InterPro:IPR017926InterPro:IPR022310InterPro:IPR022955
InterPro:IPR025777InterPro:IPR029062KEGG:00230+6.3.5.2KEGG:00983+6.3.5.2
KEGG:ath:AT1G63660KO:K01951MEROPS:C26.A07OMA:MSHGDSV
Pfam:PF00117Pfam:PF00958Pfam:PF02540Pfscan:PS51273
Pfscan:PS51553PhylomeDB:Q9CAD1PIR:E96661PROSITE:PS51273
PROSITE:PS51553Proteomes:UP000006548Reactome:R-ATH-73817RefSeq:NP_176553.1
SMR:Q9CAD1STRING:3702.AT1G63660.1SUPFAM:0047036SUPFAM:SSF52317
SUPFAM:SSF52402TAIR:AT1G63660TIGRfam:TIGR00884TIGRfam:TIGR00888
TIGRFAMs:TIGR00884TIGRFAMs:TIGR00888UniGene:At.18163unipathway:UPA00189
UniProt:Q9CAD1
Coordinates (TAIR10) chr1:-:23604127..23607080
Molecular Weight (calculated) 59318.50 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.16
Length 534 amino acids
Sequence (TAIR10)
(BLAST)
001: METPTMKPDT VLILDYGSQY THLITRRIRS LNVFSLVISG TSSLKSITSY NPRVVILSGG PHSVHALDAP SFPEGFIEWA ESNGVSVLGI CYGLQLIVQK
101: LGGVVVEGES KEYGKMEIEV KGKSEIFGSE SGGEKQMVWM SHGDEAVKLP EGFEVVAQSA QGAVAALESR KKKIYGLQYH PEVTHSPKGM ETLRHFLFDV
201: CGVSADWKME DLMEEEIKVI NKTVASDEHV ICALSGGVDS TVAATLVHKA IGDRLHCIFV DNGLLRYKEQ ERVMDTFERD LHLPVTCVDA SERFLSELKG
301: VVDPETKRKI IGREFINIFD QFAQELEKKH GKKPAFLVQG TLYPDVIESC PPPGTDRTHS HTIKSHHNVG GLPKDMKLKL IEPLKLLFKD EVRELGRILN
401: VPVGFLKRHP FPGPGLAVRV LGDVTQGNAL EVLRQVDEIF IQSIRDAGLY DSIWQAFAVF LPVRSVGVQG DKRTHSHVVA LRAVTSQDGM TADWFNFEHK
501: FLDDVSRKIC NSVQGVNRVV LDITSKPPST IEWE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)