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AT1G63640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.951
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-802-MONOMEReggNOG:COG5059eggNOG:KOG0239EMBL:CP002684EnsemblPlants:AT1G63640EnsemblPlants:AT1G63640.1entrez:842668
ExpressionAtlas:B3H6Z8Gene3D:1.10.418.10Gene3D:3.40.850.10GeneID:842668GO:GO:0003777GO:GO:0005524GO:GO:0005874
GO:GO:0005886GO:GO:0007018Gramene:AT1G63640.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF477HOGENOM:HOG000030262InParanoid:B3H6Z8
InterPro:IPR001715InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640iPTMnet:B3H6Z8KEGG:ath:AT1G63640
KO:K10406ncoils:CoilOMA:WSLPEDHPANTHER:PTHR24115PaxDb:B3H6Z8Pfam:PF00225Pfam:PF00307
Pfscan:PS50021Pfscan:PS50067PhylomeDB:B3H6Z8PRIDE:B3H6Z8PRINTS:PR00380PROSITE:PS00411PROSITE:PS50021
PROSITE:PS50067ProteinModelPortal:B3H6Z8Proteomes:UP000006548RefSeq:NP_176551.3scanprosite:PS00411SMART:SM00033SMART:SM00129
SMR:B3H6Z8STRING:3702.AT1G63640.1SUPFAM:SSF47576SUPFAM:SSF52540TAIR:AT1G63640UniGene:At.21979UniProt:B3H6Z8
Coordinates (TAIR10) chr1:-:23589234..23595139
Molecular Weight (calculated) 119792.00 Da
IEP (calculated) 7.35
GRAVY (calculated) -0.65
Length 1071 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)