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AT1G63460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione peroxidase 8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glutathione peroxidase 8 (GPX8); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 6 (TAIR:AT4G11600.1); Has 7264 Blast hits to 7263 proteins in 1725 species: Archae - 2; Bacteria - 3448; Metazoa - 795; Fungi - 210; Plants - 387; Viruses - 8; Other Eukaryotes - 2414 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G63460-MONOMEREC:1.11.1.9eggNOG:COG0386eggNOG:KOG1651EMBL:AC008047EMBL:AY086991EMBL:BT003059
EMBL:CP002684EnsemblPlants:AT1G63460EnsemblPlants:AT1G63460.1entrez:842652ExpressionAtlas:Q8LBU2Gene3D:3.40.30.10GeneID:842652
Genevisible:Q8LBU2GO:GO:0004601GO:GO:0004602GO:GO:0005634GO:GO:0005829GO:GO:0006979GO:GO:0098869
Gramene:AT1G63460.1hmmpanther:PTHR11592hmmpanther:PTHR11592:SF27HOGENOM:HOG000277054InParanoid:Q8LBU2InterPro:IPR000889InterPro:IPR012336
InterPro:IPR029759InterPro:IPR029760iPTMnet:Q8LBU2KEGG:ath:AT1G63460KO:K00432OMA:QFGDEEPPANTHER:PTHR11592
PaxDb:Q8LBU2PeroxiBase:2503Pfam:PF00255Pfam:Q8LBU2Pfscan:PS51355PhylomeDB:Q8LBU2PIR:C96660
PIRSF:PIRSF000303PRIDE:Q8LBU2PRINTS:PR01011PRO:PR:Q8LBU2PROSITE:PS00460PROSITE:PS00763PROSITE:PS51355
ProteinModelPortal:Q0WTE6ProteinModelPortal:Q8LBU2Proteomes:UP000006548Reactome:R-ATH-2142712RefSeq:NP_564813.1scanprosite:PS00460scanprosite:PS00763
SMR:Q8LBU2STRING:3702.AT1G63460.1SUPFAM:SSF52833TAIR:AT1G63460tair10-symbols:ATGPX8tair10-symbols:GPX8UniGene:At.15002
UniProt:Q0WTE6UniProt:Q8LBU2
Coordinates (TAIR10) chr1:+:23535118..23536326
Molecular Weight (calculated) 19068.50 Da
IEP (calculated) 4.85
GRAVY (calculated) -0.51
Length 167 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)