AT1G62730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Terpenoid synthases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Terpenoid synthases superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 1013 Blast hits to 1013 proteins in 466 species: Archae - 0; Bacteria - 638; Metazoa - 104; Fungi - 106; Plants - 45; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:23229204..23230118 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34034.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.00 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||
| Length | 304 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGGGSSSLR SALSYCVQQV RNYDYHHYLC LLELPTEMRK AAFALRAFNV ETARAMDVAS DPKIGLMRLL WWQEAIDKLY TKKPINHPAA QALSWAISEH 101: NISKPWLKRS VDARIRDAQR EVDDIPESIA ELEKYAEDTV STLLYNTLQA GGISSTTADH AASHIGKASG LVLLLKSLPY HCTRNRHQSY IPADLAEKHG 201: LLVKQGGRLE ILLDNDSREG LSNVVFEIAS VANAHLLKAR ELAGKVPAEA KPVLLHSVPV QVLLDSLNKV QFDVFDPRIQ RGVLGVPPLL FQFKLKWYSW 301: RAMF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)