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AT1G62640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 3-ketoacyl-acyl carrier protein synthase III
Curator
Summary (TAIR10)
3-ketoacyl-acyl carrier protein synthase III (KAS III)
Computational
Description (TAIR10)
3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 11800 Blast hits to 11794 proteins in 2811 species: Archae - 187; Bacteria - 7763; Metazoa - 5; Fungi - 2; Plants - 1625; Viruses - 0; Other Eukaryotes - 2218 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G62640-MONOMERBioCyc:ARA:GQT-1747-MONOMEREC:2.3.1.180eggNOG:COG0332eggNOG:ENOG410IH2MEMBL:AC005698EMBL:AC007190
EMBL:AY063804EMBL:AY091275EMBL:CP002684EMBL:L31891EMBL:Y11689EnsemblPlants:AT1G62640EnsemblPlants:AT1G62640.1
EnsemblPlants:AT1G62640.2entrez:842561Gene3D:3.40.47.10GeneID:842561Genevisible:P49243GO:GO:0004315GO:GO:0006633
GO:GO:0009507GO:GO:0009570GO:GO:0033818Gramene:AT1G62640.1Gramene:AT1G62640.2gramene_pathway:2.3.1.180gramene_pathway:PWY-4381
HAMAP:MF_01815hmmpanther:PTHR18919hmmpanther:PTHR18919:SF90HOGENOM:HOG000246674InParanoid:P49243InterPro:IPR004655InterPro:IPR013747
InterPro:IPR013751InterPro:IPR016039KEGG:00061+2.3.1.180KEGG:ath:AT1G62640KO:K00648OMA:ESGMYENPaxDb:P49243
Pfam:P49243Pfam:PF08541Pfam:PF08545PhylomeDB:P49243PRIDE:P49243PRO:PR:P49243ProteinModelPortal:P49243
Proteomes:UP000006548RefSeq:NP_001031221.1RefSeq:NP_176452.1SMR:P49243STRING:3702.AT1G62640.1SUPFAM:SSF53901TAIR:AT1G62640
tair10-symbols:KAS IIITIGRfam:TIGR00747TIGRFAMs:TIGR00747UniGene:At.386UniPathway:UPA00094UniProt:P49243
Coordinates (TAIR10) chr1:+:23192502..23194737
Molecular Weight (calculated) 42848.90 Da
IEP (calculated) 7.39
GRAVY (calculated) 0.01
Length 404 amino acids
Sequence (TAIR10)
(BLAST)
001: MANASGFFTH PSIPNLRSRI HVPVRVSGSG FCVSNRFSKR VLCSSVSSVD KDASSSPSQY QRPRLVPSGC KLIGCGSAVP SLLISNDDLA KIVDTNDEWI
101: ATRTGIRNRR VVSGKDSLVG LAVEAATKAL EMAEVVPEDI DLVLMCTSTP DDLFGAAPQI QKALGCTKNP LAYDITAACS GFVLGLVSAA CHIRGGGFKN
201: VLVIGADSLS RFVDWTDRGT CILFGDAAGA VVVQACDIED DGLFSFDVHS DGDGRRHLNA SVKESQNDGE SSSNGSVFGD FPPKQSSYSC IQMNGKEVFR
301: FAVKCVPQSI ESALQKAGLP ASAIDWLLLH QANQRIIDSV ATRLHFPPER VISNLANYGN TSAASIPLAL DEAVRSGKVK PGHTIATSGF GAGLTWGSAI
401: MRWR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)