suba logo
AT1G62560.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 0.402
endoplasmic reticulum 0.174
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : flavin-monooxygenase glucosinolate S-oxygenase 3
Curator
Summary (TAIR10)
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational
Description (TAIR10)
flavin-monooxygenase glucosinolate S-oxygenase 3 (FMO GS-OX3); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 15604 Blast hits to 15117 proteins in 1989 species: Archae - 85; Bacteria - 8709; Metazoa - 1148; Fungi - 1456; Plants - 809; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G62560-MONOMERBioGrid:27774EC:1.8.-.-eggNOG:COG2072eggNOG:KOG1399EMBL:AC005698EMBL:AF370136
EMBL:AY113858EMBL:CP002684EnsemblPlants:AT1G62560EnsemblPlants:AT1G62560.1entrez:842553Gene3D:3.50.50.60GeneID:842553
Genevisible:Q9SXE1GO:GO:0004499GO:GO:0016021GO:GO:0019761GO:GO:0050660GO:GO:0050661GO:GO:0080102
GO:GO:0080103GO:GO:0080104GO:GO:0080105GO:GO:0080106GO:GO:0080107Gramene:AT1G62560.1gramene_pathway:1.1.1.-
gramene_pathway:2.1.1.-gramene_pathway:PWY-1187gramene_pathway:PWYQT-4471gramene_pathway:PWYQT-4472gramene_pathway:PWYQT-4473gramene_pathway:PWYQT-4474gramene_pathway:PWYQT-4475
hmmpanther:PTHR23023hmmpanther:PTHR23023:SF94HOGENOM:HOG000237857InParanoid:Q9SXE1IntAct:Q9SXE1InterPro:IPR000960InterPro:IPR020946
InterPro:IPR023753iPTMnet:Q9SXE1KEGG:ath:AT1G62560OMA:CENFRIRPaxDb:Q9SXE1Pfam:PF00743Pfam:Q9SXE1
PhylomeDB:Q9SXE1PRIDE:Q9SXE1PRINTS:PR00370PRO:PR:Q9SXE1ProteinModelPortal:Q9SXE1Proteomes:UP000006548Reactome:R-ATH-217271
RefSeq:NP_176444.1SMR:Q9SXE1STRING:3702.AT1G62560.1SUPFAM:SSF51905TAIR:AT1G62560tair10-symbols:FMO GS-OX3UniGene:At.16349
UniProt:Q9SXE1
Coordinates (TAIR10) chr1:+:23159912..23162551
Molecular Weight (calculated) 52691.20 Da
IEP (calculated) 5.86
GRAVY (calculated) -0.44
Length 462 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)